在胶质瘤中的预后价值及免疫浸润分析
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北京市自然科学基金项目 (7232228)


The prognostic value of PDZK1IP1 and immune infiltration analysis in glioma
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    目的 探讨PDZK1IP1在胶质瘤中的临床意义及免疫浸润情况。方法 采用R软件分析TCGA数据库胶质瘤和GTEx数据库的脑组织的PDZK1IP1的表达水平。利用TCGA数据库胶质瘤的mRNA-seq及临床数据分析PDZK1IP1表达与重要临床病理特征(年龄、异柠檬酸脱氢酶(IDH)、1p/19q联合缺失、WHO分级)的关系。采用Kaplan-Meier法分析PDZK1IP1表达与总生存率(OS)的关系。GO及KEGG分析PDZK1IP1的生物学功能及可能富集的信号通路,采用Spearman相关分析PDZK1IP1表达与肿瘤组织中免疫细胞浸润关系。结果 PDZK1IP1在胶质瘤中显著富集,其表达水平与患者年龄、IDH状态、1p/19q联合缺失及WHO分级显著相关,且高表达PDZK1IP1的患者OS更差。PDZK1IP1的表达与肿瘤微环境中的中性粒细胞及巨噬细胞浸润显著相关。结论 DZK1IP1可能是胶质瘤潜在的生物学标志物,其可能通过调节胶质瘤复杂的肿瘤免疫微环境而促进胶质瘤恶性进展

    Abstract:

    Objective To investigate the clinical significance of PDZK1IP1 and immune infiltration in gliomas. Methods The expression levels of PDZK1IP1 in gliomas from the TCGA database and brain tissues from the GTEx database were analyzed using R software. mRNA-seq and clinical data from the TCGA database were used to analyze the relationship between PDZK1IP1 expression and important clinical pathological features (age, isocitrate dehydrogenase (IDH) status, 1p/19q co-deletion, WHO grade) in gliomas. Kaplan-Meier analysis was performed to assess the relationship between PDZK1IP1 expression and overall survival (OS). GO and KEGG analyses were conducted to explore the biological functions and potential signaling pathways enriched by PDZK1IP1. Spearman correlation analysis was used to investigate the relationship between PDZK1IP1 expression and immune cell infiltration in tumor tissues. Results PDZK1IP1 was significantly enriched in gliomas, and its expression level was significantly associated with patient age, IDH status, 1p/19q co-deletion, and WHO grade. Patients with high PDZK1IP1 expression had worse OS PDZK1IP1 expression was significantly correlated with neutrophil and macrophage infiltration in the tumor microenvironment. Conclusion PDZK1IP1 may serve as a potential biomarker in gliomas, potentially promoting malignant progression by modulating the complex tumor immune microenvironment in gliomas

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  • 在线发布日期: 2024-12-20
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